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Top: Simulink <t>(MATLAB)</t> implementation of the physiologically-inspired model in . The bar speed (90° s –1 ) is integrated over a quite narrow time window (~200 ms) and the integration starts with a spatial offset with respect to the visual midline (~11°). This means that T3 neurons might encode the bar speed and a downstream partner might integrate this information over a selective amount of time, encoding the bar position and triggering a saccade when the amount of calcium reaches a specific threshold. In this model, saccade amplitudes are considered a fixed parameter (30°) but in an alternative version they could be easily tuned to the bar speed. Bottom: simulation of the fly behavior (angular position) in a bar tracking task according to the control model.
Custom Written Matlab Code, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Top: Simulink <t>(MATLAB)</t> implementation of the physiologically-inspired model in . The bar speed (90° s –1 ) is integrated over a quite narrow time window (~200 ms) and the integration starts with a spatial offset with respect to the visual midline (~11°). This means that T3 neurons might encode the bar speed and a downstream partner might integrate this information over a selective amount of time, encoding the bar position and triggering a saccade when the amount of calcium reaches a specific threshold. In this model, saccade amplitudes are considered a fixed parameter (30°) but in an alternative version they could be easily tuned to the bar speed. Bottom: simulation of the fly behavior (angular position) in a bar tracking task according to the control model.
Red Gaussian Random Dot Pattern, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Top: Simulink <t>(MATLAB)</t> implementation of the physiologically-inspired model in . The bar speed (90° s –1 ) is integrated over a quite narrow time window (~200 ms) and the integration starts with a spatial offset with respect to the visual midline (~11°). This means that T3 neurons might encode the bar speed and a downstream partner might integrate this information over a selective amount of time, encoding the bar position and triggering a saccade when the amount of calcium reaches a specific threshold. In this model, saccade amplitudes are considered a fixed parameter (30°) but in an alternative version they could be easily tuned to the bar speed. Bottom: simulation of the fly behavior (angular position) in a bar tracking task according to the control model.
Custom Built Matlab Toolbox, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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MathWorks Inc psychophysics toolbox in matlab
Top: Simulink <t>(MATLAB)</t> implementation of the physiologically-inspired model in . The bar speed (90° s –1 ) is integrated over a quite narrow time window (~200 ms) and the integration starts with a spatial offset with respect to the visual midline (~11°). This means that T3 neurons might encode the bar speed and a downstream partner might integrate this information over a selective amount of time, encoding the bar position and triggering a saccade when the amount of calcium reaches a specific threshold. In this model, saccade amplitudes are considered a fixed parameter (30°) but in an alternative version they could be easily tuned to the bar speed. Bottom: simulation of the fly behavior (angular position) in a bar tracking task according to the control model.
Psychophysics Toolbox In Matlab, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Top: Simulink <t>(MATLAB)</t> implementation of the physiologically-inspired model in . The bar speed (90° s –1 ) is integrated over a quite narrow time window (~200 ms) and the integration starts with a spatial offset with respect to the visual midline (~11°). This means that T3 neurons might encode the bar speed and a downstream partner might integrate this information over a selective amount of time, encoding the bar position and triggering a saccade when the amount of calcium reaches a specific threshold. In this model, saccade amplitudes are considered a fixed parameter (30°) but in an alternative version they could be easily tuned to the bar speed. Bottom: simulation of the fly behavior (angular position) in a bar tracking task according to the control model.
Custom Written Code In, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Matlab R2017b, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Custom Designed Code, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Customized Code Matlab R2014a, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Custom Written Code, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Image Search Results


Top: Simulink (MATLAB) implementation of the physiologically-inspired model in . The bar speed (90° s –1 ) is integrated over a quite narrow time window (~200 ms) and the integration starts with a spatial offset with respect to the visual midline (~11°). This means that T3 neurons might encode the bar speed and a downstream partner might integrate this information over a selective amount of time, encoding the bar position and triggering a saccade when the amount of calcium reaches a specific threshold. In this model, saccade amplitudes are considered a fixed parameter (30°) but in an alternative version they could be easily tuned to the bar speed. Bottom: simulation of the fly behavior (angular position) in a bar tracking task according to the control model.

Journal: eLife

Article Title: Columnar neurons support saccadic bar tracking in Drosophila

doi: 10.7554/eLife.83656

Figure Lengend Snippet: Top: Simulink (MATLAB) implementation of the physiologically-inspired model in . The bar speed (90° s –1 ) is integrated over a quite narrow time window (~200 ms) and the integration starts with a spatial offset with respect to the visual midline (~11°). This means that T3 neurons might encode the bar speed and a downstream partner might integrate this information over a selective amount of time, encoding the bar position and triggering a saccade when the amount of calcium reaches a specific threshold. In this model, saccade amplitudes are considered a fixed parameter (30°) but in an alternative version they could be easily tuned to the bar speed. Bottom: simulation of the fly behavior (angular position) in a bar tracking task according to the control model.

Article Snippet: Both stimuli were generated, as mentioned above, using custom-written MATLAB code and randomly chosen during each trial among 96 different patterns.

Techniques: Control

KEY RESOURCES TABLE

Journal: Neuron

Article Title: Propagating motor cortical dynamics facilitate movement initiation

doi: 10.1016/j.neuron.2020.02.011

Figure Lengend Snippet: KEY RESOURCES TABLE

Article Snippet: ​ REAGENT or RESOURCE SOURCE IDENTIFIER Deposited Data Behavioral Data This paper Available upon request Neural Data This paper Available upon request Software and Algorithms Matlab Mathworks Inc. Matlab R2017b Neural Network Toolbox Mathworks Inc. Matlab R2017b Custom code (to run stimulation and generate figures) This paper C/C++ and Matlab; Available upon request Von Mises Fit N/A https://github.com/chrschy/mvmdist/tree/v1.0 Circular Statistics N/A https://github.com/circstat/circstat-matlab Chronux Toolbox Chronux Chronux V 2.10 Open in a separate window KEY RESOURCES TABLE Patterns of excitability propagate across M1 along the rostro-caudal axis.

Techniques: Software